EnhancerDB
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  3. rs561335343[chr12:46892326]
Enhancers that have rs561335343[chr12:46892326]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46872285 46895935 enh14678
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Lung Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs561335343[chr12:46892326]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46892210 46892598 TCF7L2 GTRD no Colon (HCT116) 21542093
chr12 46892225 46892511 SOX2 GTRD no Neural Stem Cells (H9) 21542094
chr12 46892325 46892329 LFA1 TRANSFAC yes 120630383
Genes associated with rs561335343[chr12:46892326], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More