EnhancerDB
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  3. rs561341978[chr16:88850043]
Enhancers that have rs561341978[chr16:88850043]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs561341978[chr16:88850043]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88850034 88850048 FOXF2 JASPAR yes 12304150
chr16 88850035 88850043 FOXD1 JASPAR yes 12304151
chr16 88850035 88850043 FOXO3 JASPAR yes 12304152
chr16 88850036 88850043 FOXD2 JASPAR yes 12304153
chr16 88850036 88850043 FOXI1 JASPAR yes 12304154
chr16 88850036 88850043 FOXL1 JASPAR yes 12304155
chr16 88850036 88850043 FOXO4 JASPAR yes 12304156
chr16 88850036 88850043 FOXO6 JASPAR yes 12304157
chr16 88850036 88850043 FOXP3 JASPAR yes 12304158
chr16 88850036 88850047 HOXD12 JASPAR yes 12304159
chr16 88850042 88850057 ESR2 JASPAR yes 12304160
Genes associated with rs561341978[chr16:88850043], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More