EnhancerDB
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  3. rs561396752[chr1:235133876]
Enhancers that have rs561396752[chr1:235133876]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs561396752[chr1:235133876]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235132889 235134652 POLR2A UCSC Txn Factor no Conserved 107885447
chr1 235132889 235134652 POLR2A UCSC Txn Factor no Conserved 107885448
chr1 235133597 235133941 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402866
chr1 235133762 235134422 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402867
chr1 235133762 235134422 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107885526
chr1 235133840 235134130 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402868
chr1 235133840 235134130 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107885527
chr1 235133841 235134244 ZBTB33 GTRD no Lung (A549) 107885528
chr1 235133858 235133878 RREB1 JASPAR yes 36340097
chr1 235133859 235133879 RREB1 JASPAR yes 36340098
chr1 235133859 235134100 ZNF274 GTRD no Liver (HepG2) 21402869
chr1 235133859 235134100 ZNF274 GTRD no Liver (HepG2) 107885529
chr1 235133868 235133889 ZNF263 JASPAR yes 36340099
chr1 235133871 235133876 SP1 TRANSFAC yes 36340100
Genes associated with rs561396752[chr1:235133876], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More