EnhancerDB
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  3. rs561400284[chr1:24627379]
Enhancers that have rs561400284[chr1:24627379]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs561400284[chr1:24627379]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24627369 24627384 NR2C2 JASPAR yes 27498327
chr1 24627369 24627390 ZNF263 JASPAR yes 27498328
chr1 24627371 24627382 E2F6 JASPAR yes 27498330
chr1 24627373 24627381 SP1 TRANSFAC yes 27498331
chr1 24627375 24627381 MAZ TRANSFAC yes 27498332
chr1 24627379 24627383 LFA1 TRANSFAC yes 27498333
Genes associated with rs561400284[chr1:24627379], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More