EnhancerDB
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  3. rs56142307[chr17:57878149]
Enhancers that have rs56142307[chr17:57878149]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57857985 57884695 enh4506
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs56142307[chr17:57878149]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57877695 57883604 ZBTB33 GTRD no Lung (A549) 108277573
chr17 57877695 57883604 ZBTB33 GTRD no Lung (A549) 108277574
chr17 57877695 57883604 ZBTB33 GTRD no Lung (A549) 108277575
chr17 57877722 57880790 ZBTB33 GTRD no Lung (A549) 108277576
chr17 57877739 57878703 ZBTB33 GTRD no Lung (A549) 108277577
chr17 57877757 57878297 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108277578
chr17 57877772 57878672 ZNF274 GTRD no Bone Marrow (K562) 21775945
chr17 57877772 57878672 ZNF274 GTRD no Bone Marrow (K562) 108277579
chr17 57877833 57880578 ZBTB33 GTRD no Brain (SK-N-SH) 21775946
chr17 57877833 57880578 ZBTB33 GTRD no Brain (SK-N-SH) 108277580
chr17 57877893 57883534 ZBTB33 GTRD no Lung (A549) 108277581
chr17 57877893 57883534 ZBTB33 GTRD no Lung (A549) 108277582
chr17 57877893 57883534 ZBTB33 GTRD no Lung (A549) 108277583
chr17 57877907 57880796 ZBTB33 GTRD no Lung (A549) 108277584
chr17 57877921 57880755 ZBTB33 GTRD no Lung (A549) 108277585
chr17 57877941 57878457 ZNF274 GTRD no Blood (GM12878) 21775947
chr17 57877941 57878457 ZNF274 GTRD no Blood (GM12878) 108277586
chr17 57877965 57878587 ZNF274 GTRD no Blood (GM12878) 21775948
chr17 57877965 57878587 ZNF274 GTRD no Blood (GM12878) 108277587
chr17 57878043 57878451 ZNF274 GTRD no Blood (GM12878) 21775949
chr17 57878043 57878451 ZNF274 GTRD no Blood (GM12878) 108277588
Genes associated with rs56142307[chr17:57878149], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 58029601 58042122 - RNFT1 ENSG00000189050.10 58042122 151452 Adrenal 0.000652639 16110