EnhancerDB
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  3. rs561448427[chr15:59594146]
Enhancers that have rs561448427[chr15:59594146]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 59580969 59601625 enh16190
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs561448427[chr15:59594146]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 59594138 59594148 EN2 JASPAR yes 23726483
chr15 59594138 59594148 GBX1 JASPAR yes 23726484
chr15 59594138 59594148 GBX2 JASPAR yes 23726485
chr15 59594138 59594148 HOXB3 JASPAR yes 23726486
chr15 59594139 59594147 BARX1 JASPAR yes 23726487
chr15 59594139 59594147 EN1 JASPAR yes 23726488
chr15 59594139 59594147 ISL2 JASPAR yes 23726489
chr15 59594139 59594147 MSX1 JASPAR yes 23726490
chr15 59594139 59594147 MSX2 JASPAR yes 23726491
chr15 59594139 59594147 PDX1 JASPAR yes 23726492
chr15 59594139 59594148 VENTX JASPAR yes 23726493
Genes associated with rs561448427[chr15:59594146], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More