EnhancerDB
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  3. rs561500185[chr17:2799655]
Enhancers that have rs561500185[chr17:2799655]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs561500185[chr17:2799655]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2795210 2800120 ZNF143 GTRD no Epithelial (MCF-7) 21739739
chr17 2795210 2800120 ZNF143 GTRD no Epithelial (MCF-7) 108231314
chr17 2799646 2799656 SP1 JASPAR yes 52783822
chr17 2799654 2799668 ZIC1 JASPAR yes 52783823
chr17 2799654 2799669 ZIC3 JASPAR yes 52783824
chr17 2799654 2799669 ZIC4 JASPAR yes 52783825
Genes associated with rs561500185[chr17:2799655], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More