EnhancerDB
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  3. rs561520569[chr12:122598011]
Enhancers that have rs561520569[chr12:122598011]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs561520569[chr12:122598011]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122598000 122598018 IRF2 JASPAR yes 124267715
chr12 122598005 122598017 HLF JASPAR yes 124267716
Genes associated with rs561520569[chr12:122598011], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More