EnhancerDB
  1. Home
  2. SNP
  3. rs561520653[chr1:33461088]
Enhancers that have rs561520653[chr1:33461088]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33442929 33472683 enh216
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
Transcript factors that have rs561520653[chr1:33461088]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33461072 33461090 IRF2 JASPAR yes 28020778
chr1 33461085 33461098 ATF4 JASPAR yes 28020779
chr1 33461087 33461101 POU4F1 JASPAR yes 28020780
chr1 33461087 33461103 POU4F2 JASPAR yes 28020781
chr1 33461087 33461103 POU4F3 JASPAR yes 28020782
Genes associated with rs561520653[chr1:33461088], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More