EnhancerDB
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  3. rs56159078[chr16:29170454]
Enhancers that have rs56159078[chr16:29170454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29150646 29173335 enh16623
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Lung (A549) Stomach Placenta Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs56159078[chr16:29170454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29170341 29171032 ZBTB33 GTRD no Brain (SK-N-SH) 21701846
chr16 29170341 29171032 ZBTB33 GTRD no Brain (SK-N-SH) 108191379
chr16 29170400 29171022 MYOD GTRD no Muscle (Myoblast) 108191380
chr16 29170406 29171716 ZBTB33 GTRD no Brain (SK-N-SH) 21701847
chr16 29170406 29171716 ZBTB33 GTRD no Brain (SK-N-SH) 108191381
chr16 29170447 29170462 TFAP2C JASPAR yes 10246618
chr16 29170449 29170464 TFAP2A JASPAR yes 10246619
chr16 29170450 29170461 TFAP2A JASPAR yes 10246620
chr16 29170450 29170461 TFAP2B JASPAR yes 10246621
chr16 29170450 29170461 TFAP2C JASPAR yes 10246622
Genes associated with rs56159078[chr16:29170454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More