EnhancerDB
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  3. rs56160414[chr1:234690145]
Enhancers that have rs56160414[chr1:234690145]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56160414[chr1:234690145]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234690139 234690149 MSC JASPAR yes 36287909
chr1 234690144 234690148 NFE TRANSFAC yes 36287910
chr1 234690145 234690150 GATA2 JASPAR yes 36287911
Genes associated with rs56160414[chr1:234690145], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 234740015 234745271 - IRF2BP2 ENSG00000168264.6 234745271 49870 Ovary 0.334224 1964