EnhancerDB
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  3. rs561648966[chr6:11225716]
Enhancers that have rs561648966[chr6:11225716]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs561648966[chr6:11225716]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11225707 11225717 MSC JASPAR yes 99866736
chr6 11225711 11225731 RREB1 JASPAR yes 99866737
chr6 11225715 11225721 TCF4 TRANSFAC yes 99866738
chr6 11225715 11225727 FOXI1 JASPAR yes 99866739
chr6 11225715 11225730 FOXP1 JASPAR yes 99866740
Genes associated with rs561648966[chr6:11225716], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More