EnhancerDB
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  3. rs56165882[chr1:173371992]
Enhancers that have rs56165882[chr1:173371992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs56165882[chr1:173371992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173371982 173371995 POU2F2 JASPAR yes 33195387
chr1 173371982 173371996 POU1F1 JASPAR yes 33195388
chr1 173371983 173371995 POU3F1 JASPAR yes 33195389
chr1 173371983 173371995 POU3F2 JASPAR yes 33195390
chr1 173371983 173371996 POU3F3 JASPAR yes 33195391
chr1 173371984 173371996 POU2F1 JASPAR yes 33195392
chr1 173371985 173371992 POU2F1 TRANSFAC yes 33195393
chr1 173371985 173371992 POU2F2C TRANSFAC yes 33195394
chr1 173371985 173371992 POU2F2 TRANSFAC yes 33195395
chr1 173371985 173371993 POU2F1 TRANSFAC yes 33195396
chr1 173371985 173371994 POU3F4 JASPAR yes 33195397
chr1 173371985 173371994 POU5F1B JASPAR yes 33195398
chr1 173371987 173372008 IRF1 JASPAR yes 33195399
chr1 173371989 173372010 IRF1 JASPAR yes 33195400
chr1 173371990 173371994 YY1 TRANSFAC yes 33195401
chr1 173371991 173372006 FOXP1 JASPAR yes 33195402
chr1 173371992 173372007 FOXP1 JASPAR yes 33195403
Genes associated with rs56165882[chr1:173371992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More