EnhancerDB
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  3. rs561686228[chr18:55893667]
Enhancers that have rs561686228[chr18:55893667]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55867165 55894619 enh32734
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs561686228[chr18:55893667]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55892975 55893754 ZNF274 GTRD no Bone Marrow (K562) 21824086
chr18 55892975 55893754 ZNF274 GTRD no Bone Marrow (K562) 108338241
chr18 55892983 55893689 ZNF274 GTRD no Bone Marrow (K562) 21824087
chr18 55892983 55893689 ZNF274 GTRD no Bone Marrow (K562) 108338242
chr18 55892990 55894500 ZNF274 GTRD no Bone Marrow (K562) 21824088
chr18 55892990 55894500 ZNF274 GTRD no Bone Marrow (K562) 108338243
chr18 55892996 55893773 ZNF274 GTRD no Bone Marrow (K562) 21824089
chr18 55892996 55893773 ZNF274 GTRD no Bone Marrow (K562) 108338244
chr18 55893211 55893970 ZNF274 GTRD no Bone Marrow (K562) 21824090
chr18 55893211 55893970 ZNF274 GTRD no Bone Marrow (K562) 108338245
chr18 55893352 55894154 ZNF274 GTRD no Bone Marrow (K562) 21824091
chr18 55893352 55894154 ZNF274 GTRD no Bone Marrow (K562) 108338246
chr18 55893657 55893671 ONECUT1 JASPAR yes 42714604
chr18 55893657 55893671 ONECUT2 JASPAR yes 42714605
chr18 55893657 55893671 ONECUT3 JASPAR yes 42714606
chr18 55893657 55893671 ONECUT1 JASPAR yes 110929469
chr18 55893657 55893671 ONECUT2 JASPAR yes 110929470
chr18 55893657 55893671 ONECUT3 JASPAR yes 110929471
chr18 55893658 55893668 CUX1 JASPAR yes 110929472
chr18 55893658 55893668 CUX2 JASPAR yes 110929473
chr18 55893658 55893668 PAX3 JASPAR yes 110929474
chr18 55893658 55893668 PAX7 JASPAR yes 110929475
Genes associated with rs561686228[chr18:55893667], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More