EnhancerDB
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  3. rs561715201[chr18:55948096]
Enhancers that have rs561715201[chr18:55948096]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55922865 55949275 enh17739
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs561715201[chr18:55948096]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55948089 55948100 BATF JASPAR yes 110936145
chr18 55948093 55948105 PKNOX2 JASPAR yes 110936146
chr18 55948093 55948105 TGIF1 JASPAR yes 110936147
chr18 55948093 55948106 JUN JASPAR yes 110936148
chr18 55948094 55948107 ATF4 JASPAR yes 110936149
Genes associated with rs561715201[chr18:55948096], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More