EnhancerDB
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  3. rs561819985[chr1:235122671]
Enhancers that have rs561819985[chr1:235122671]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 235122652 235122939 vista5681
VISTA
Transcript factors that have rs561819985[chr1:235122671]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235122644 235123014 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402629
chr1 235122644 235123014 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885419
chr1 235122660 235122671 FOXH1 JASPAR yes 36338718
chr1 235122660 235122671 FOXH1 JASPAR yes 118487087
chr1 235122661 235123045 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402630
chr1 235122661 235123045 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885420
Genes associated with rs561819985[chr1:235122671], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More