EnhancerDB
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  3. rs56182016[chr2:238641117]
Enhancers that have rs56182016[chr2:238641117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238630290 238646675 enh34436
Skin (Keratinocyte) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Uterus Pancreas Neural Stem Cells (H9) Stomach
Transcript factors that have rs56182016[chr2:238641117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238641103 238641118 SOX21 JASPAR yes 82138008
chr2 238641103 238641119 SOX4 JASPAR yes 82138009
chr2 238641107 238641118 HOXA10 JASPAR yes 82138010
chr2 238641108 238641118 GBX2 JASPAR yes 82138011
chr2 238641108 238641118 GSX2 JASPAR yes 82138012
chr2 238641108 238641118 HOXB3 JASPAR yes 82138013
chr2 238641108 238641118 MNX1 JASPAR yes 82138014
chr2 238641108 238641118 RAX JASPAR yes 82138015
chr2 238641108 238641126 MAFF JASPAR yes 82138016
chr2 238641109 238641117 BARX1 JASPAR yes 82138017
chr2 238641109 238641117 BSX JASPAR yes 82138018
chr2 238641109 238641117 ISL2 JASPAR yes 82138019
chr2 238641109 238641117 LMX1B JASPAR yes 82138020
chr2 238641109 238641117 MSX1 JASPAR yes 82138021
chr2 238641109 238641117 MSX2 JASPAR yes 82138022
chr2 238641109 238641118 VENTX JASPAR yes 82138023
chr2 238641110 238641121 NRL JASPAR yes 82138024
chr2 238641110 238641125 MAFK JASPAR yes 82138025
chr2 238641116 238641123 GATA1 TRANSFAC yes 82138026
chr2 238641116 238641129 DUXA JASPAR yes 82138027
chr2 238641117 238641128 DUX4 JASPAR yes 82138028
Genes associated with rs56182016[chr2:238641117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More