EnhancerDB
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  3. rs561850941[chr1:19739445]
Enhancers that have rs561850941[chr1:19739445]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs561850941[chr1:19739445]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19739438 19739448 MZF1 JASPAR yes 27187200
chr1 19739439 19739445 MZF1 JASPAR yes 27187201
chr1 19739441 19739450 CDX1 JASPAR yes 27187202
chr1 19739441 19739451 HOXA13 JASPAR yes 27187203
chr1 19739441 19739451 HOXB13 JASPAR yes 27187204
chr1 19739441 19739451 HOXD13 JASPAR yes 27187205
Genes associated with rs561850941[chr1:19739445], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More