EnhancerDB
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  3. rs56185829[chr6:11209669]
Enhancers that have rs56185829[chr6:11209669]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56185829[chr6:11209669]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11209649 11209670 REST JASPAR yes 99864495
chr6 11209652 11209673 IRF1 JASPAR yes 99864496
chr6 11209654 11209669 IRF9 JASPAR yes 99864497
chr6 11209655 11209669 IRF7 JASPAR yes 99864498
chr6 11209656 11209671 PRDM1 JASPAR yes 99864499
chr6 11209656 11209674 IRF2 JASPAR yes 99864500
chr6 11209664 11209679 RUNX2 JASPAR yes 99864501
Genes associated with rs56185829[chr6:11209669], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More