EnhancerDB
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  3. rs561890452[chr1:19767106]
Enhancers that have rs561890452[chr1:19767106]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs561890452[chr1:19767106]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19767095 19767111 GLIS1 JASPAR yes 27190555
chr1 19767098 19767108 ZNF740 JASPAR yes 27190556
chr1 19767100 19767110 ZNF740 JASPAR yes 27190557
chr1 19767103 19767113 SP1 JASPAR yes 27190558
chr1 19767105 19767110 ETS2 TRANSFAC yes 27190559
Genes associated with rs561890452[chr1:19767106], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More