EnhancerDB
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  3. rs56190394[chr1:8451727]
Enhancers that have rs56190394[chr1:8451727]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8427225 8493496 enh42
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56190394[chr1:8451727]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8451713 8451731 MAFF JASPAR yes 26547329
chr1 8451714 8451729 MAFK JASPAR yes 26547330
chr1 8451718 8451729 NRL JASPAR yes 26547331
chr1 8451723 8451737 POU1F1 JASPAR yes 26547332
chr1 8451724 8451736 POU3F1 JASPAR yes 26547333
chr1 8451724 8451737 POU3F3 JASPAR yes 26547334
chr1 8451725 8451730 H4TF1 TRANSFAC yes 26547335
Genes associated with rs56190394[chr1:8451727], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More