EnhancerDB
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  3. rs561935854[chr1:235151812]
Enhancers that have rs561935854[chr1:235151812]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
chr1 235151501 235151917 vista5686
VISTA
Transcript factors that have rs561935854[chr1:235151812]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235151328 235151918 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403121
chr1 235151328 235151918 IKZF1 UCSC Txn Factor no Conserved 107885588
chr1 235151328 235151918 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885589
chr1 235151332 235151964 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403122
chr1 235151332 235151964 NFIC UCSC Txn Factor no Conserved 107885590
chr1 235151332 235151964 NFIC UCSC Txn Factor no Conserved 107885591
chr1 235151332 235151964 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885592
chr1 235151332 235151964 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885593
chr1 235151360 235151876 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403123
chr1 235151360 235151876 RUNX3 UCSC Txn Factor no Conserved 107885594
chr1 235151360 235151876 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885595
chr1 235151371 235151887 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403124
chr1 235151371 235151887 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885596
chr1 235151382 235151862 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403125
chr1 235151382 235151862 ATF2 UCSC Txn Factor no Conserved 107885597
chr1 235151382 235151862 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885598
chr1 235151395 235151830 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403126
chr1 235151395 235151830 FOXM1 UCSC Txn Factor no Conserved 107885599
chr1 235151395 235151830 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885600
chr1 235151428 235151838 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403128
chr1 235151428 235151838 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885602
chr1 235151431 235151861 RELA UCSC Txn Factor no Conserved 107885603
chr1 235151433 235151843 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403129
chr1 235151433 235151843 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885604
chr1 235151455 235151835 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403132
chr1 235151455 235151835 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885607
chr1 235151458 235151838 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403133
chr1 235151458 235151838 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885608
chr1 235151490 235151830 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403140
chr1 235151490 235151830 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885616
chr1 235151501 235151831 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403141
chr1 235151501 235151831 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885617
chr1 235151519 235151843 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403144
chr1 235151519 235151843 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885620
chr1 235151522 235151826 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403145
chr1 235151522 235151826 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885621
chr1 235151528 235151959 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403146
chr1 235151528 235151959 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885622
chr1 235151528 235151959 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885623
chr1 235151610 235151874 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403155
chr1 235151610 235151874 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885633
chr1 235151667 235152108 TCF7L2 GTRD no Colon (HCT116) 107885635
chr1 235151667 235152108 TCF7L2 GTRD no Colon (HCT116) 107885636
chr1 235151735 235151925 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403157
chr1 235151735 235151925 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885637
chr1 235151735 235151925 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885638
chr1 235151809 235151824 HSF1 JASPAR yes 36342703
chr1 235151809 235151824 HSF1 JASPAR yes 118487357
chr1 235151810 235151823 HSF1 JASPAR yes 36342704
chr1 235151810 235151823 HSF2 JASPAR yes 36342705
chr1 235151810 235151823 HSF4 JASPAR yes 36342706
chr1 235151810 235151823 HSF1 JASPAR yes 118487358
chr1 235151810 235151823 HSF2 JASPAR yes 118487359
chr1 235151810 235151823 HSF4 JASPAR yes 118487360
chr1 235151812 235151827 STAT1 JASPAR yes 36342707
chr1 235151812 235151827 STAT1 JASPAR yes 118487361
Genes associated with rs561935854[chr1:235151812], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More