EnhancerDB
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  3. rs56199309[chr2:238574941]
Enhancers that have rs56199309[chr2:238574941]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238567229 238591955 enh19400
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56199309[chr2:238574941]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238574936 238574956 RREB1 JASPAR yes 82129386
chr2 238574937 238574958 IRF1 JASPAR yes 82129387
chr2 238574938 238574953 RUNX2 JASPAR yes 82129388
chr2 238574941 238574953 IRF1 JASPAR yes 82129389
chr2 238574941 238574955 IRF7 JASPAR yes 82129390
chr2 238574941 238574956 IRF9 JASPAR yes 82129391
Genes associated with rs56199309[chr2:238574941], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More