EnhancerDB
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  3. rs562021353[chr5:77887604]
Enhancers that have rs562021353[chr5:77887604]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77878525 77914000 enh48956
Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs562021353[chr5:77887604]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77887593 77887606 TFAP2A JASPAR yes 63603529
chr5 77887593 77887606 TFAP2B JASPAR yes 63603530
chr5 77887593 77887606 TFAP2C JASPAR yes 63603531
chr5 77887604 77887625 IRF1 JASPAR yes 63603532
Genes associated with rs562021353[chr5:77887604], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More