EnhancerDB
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  3. rs562021425[chr5:77880681]
Enhancers that have rs562021425[chr5:77880681]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77878525 77914000 enh48956
Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs562021425[chr5:77880681]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77880665 77880685 TP53 JASPAR yes 63602750
chr5 77880677 77880681 LFA1 TRANSFAC yes 63602751
chr5 77880680 77880691 YY2 JASPAR yes 63602752
Genes associated with rs562021425[chr5:77880681], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More