EnhancerDB
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  3. rs562023347[chr11:12454706]
Enhancers that have rs562023347[chr11:12454706]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12449945 12474246 enh13781
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs562023347[chr11:12454706]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12454613 12455340 ZBTB33 GTRD no Brain (SK-N-SH) 21471723
chr11 12454613 12455340 ZBTB33 GTRD no Brain (SK-N-SH) 107959260
chr11 12454616 12455483 ZBTB33 GTRD no Brain (SK-N-SH) 21471724
chr11 12454616 12455483 ZBTB33 GTRD no Brain (SK-N-SH) 107959261
chr11 12454650 12455424 ZBTB33 GTRD no Brain (SK-N-SH) 21471725
chr11 12454650 12455424 ZBTB33 GTRD no Brain (SK-N-SH) 107959262
chr11 12454699 12454714 HNF4G JASPAR yes 37445848
chr11 12454702 12454720 IRF2 JASPAR yes 37445849
chr11 12454703 12454724 IRF1 JASPAR yes 37445850
chr11 12454705 12454720 PRDM1 JASPAR yes 37445851
chr11 12454705 12454720 STAT2 JASPAR yes 37445852
chr11 12454706 12454720 STAT1 JASPAR yes 37445853
Genes associated with rs562023347[chr11:12454706], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More