EnhancerDB
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  3. rs562042714[chr16:89524449]
Enhancers that have rs562042714[chr16:89524449]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562042714[chr16:89524449]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89524443 89524453 TCF3 JASPAR yes 12347119
chr16 89524444 89524453 SNAI2 JASPAR yes 12347120
chr16 89524445 89524450 USF2 TRANSFAC yes 12347121
Genes associated with rs562042714[chr16:89524449], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More