EnhancerDB
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  3. rs562133831[chr17:43380409]
Enhancers that have rs562133831[chr17:43380409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs562133831[chr17:43380409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43379934 43380498 ZNF274 GTRD no Liver (HepG2) 21764255
chr17 43379941 43380461 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764256
chr17 43379971 43380547 ZNF274 GTRD no Liver (HepG2) 21764258
chr17 43379984 43380563 ZNF274 GTRD no Liver (HepG2) 21764260
chr17 43380001 43380591 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764263
chr17 43380007 43380409 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764264
chr17 43380060 43380687 STAT3 GTRD no Blood (OCI-LY7) 21764275
chr17 43380061 43380561 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764276
chr17 43380086 43380626 ZNF274 GTRD no Liver (HepG2) 21764283
chr17 43380159 43380515 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21764285
chr17 43380180 43380662 ZNF274 GTRD no Blood (GM12878) 21764286
chr17 43380274 43380678 ZNF274 GTRD no Blood (GM12878) 21764287
chr17 43380294 43380577 ZNF274 GTRD no Liver (HepG2) 21764288
chr17 43380400 43380418 TP53 JASPAR yes 54441684
Genes associated with rs562133831[chr17:43380409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More