EnhancerDB
  1. Home
  2. SNP
  3. rs562154559[chr3:153011974]
Enhancers that have rs562154559[chr3:153011974]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 152999949 153013375 enh21048
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562154559[chr3:153011974]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 153011966 153011982 SOX8 JASPAR yes 6758998
chr3 153011970 153011976 LEF1 TRANSFAC yes 6758999
chr3 153011970 153011976 SOX10 JASPAR yes 6759000
chr3 153011971 153011986 MEF2A JASPAR yes 6759001
chr3 153011972 153011987 MEF2C JASPAR yes 6759002
chr3 153011973 153011985 MEF2A JASPAR yes 6759003
chr3 153011973 153011985 MEF2D JASPAR yes 6759004
Genes associated with rs562154559[chr3:153011974], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More