EnhancerDB
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  3. rs562189484[chr2:38658489]
Enhancers that have rs562189484[chr2:38658489]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38653105 38683515 enh33236
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Breast Uterus Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs562189484[chr2:38658489]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38658480 38658499 CTCF JASPAR yes 73139604
chr2 38658483 38658497 GLIS3 JASPAR yes 73139605
chr2 38658483 38658497 ZIC1 JASPAR yes 73139606
chr2 38658483 38658498 SCRT1 JASPAR yes 73139607
chr2 38658483 38658498 ZIC3 JASPAR yes 73139608
chr2 38658483 38658498 ZIC4 JASPAR yes 73139609
Genes associated with rs562189484[chr2:38658489], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More