EnhancerDB
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  3. rs562229774[chr1:234629636]
Enhancers that have rs562229774[chr1:234629636]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562229774[chr1:234629636]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234628189 234629899 ZNF274 GTRD no Blood (GM12878) 21393295
chr1 234629626 234629637 TBX20 JASPAR yes 36278502
chr1 234629627 234629638 E2F6 JASPAR yes 36278504
chr1 234629631 234629636 ETS2 TRANSFAC yes 36278506
Genes associated with rs562229774[chr1:234629636], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More