EnhancerDB
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  3. rs562295904[chr17:2746856]
Enhancers that have rs562295904[chr17:2746856]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs562295904[chr17:2746856]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2746845 2746864 PITX2 TRANSFAC yes 52776072
chr17 2746851 2746864 ZBTB18 JASPAR yes 52776073
chr17 2746852 2746864 PKNOX1 JASPAR yes 52776074
chr17 2746852 2746864 TGIF1 JASPAR yes 52776075
chr17 2746853 2746862 SNAI2 JASPAR yes 52776076
chr17 2746853 2746863 FIGLA JASPAR yes 52776077
chr17 2746853 2746863 ID4 JASPAR yes 52776078
chr17 2746853 2746863 TCF3 JASPAR yes 52776079
chr17 2746853 2746863 TCF4 JASPAR yes 52776080
chr17 2746855 2746864 ZEB1 JASPAR yes 52776081
chr17 2746855 2746865 TBX21 JASPAR yes 52776082
chr17 2746856 2746864 MGA JASPAR yes 52776083
chr17 2746856 2746864 TBX15 JASPAR yes 52776084
chr17 2746856 2746864 TBX1 JASPAR yes 52776085
chr17 2746856 2746864 TBX4 JASPAR yes 52776086
chr17 2746856 2746864 TBX5 JASPAR yes 52776087
chr17 2746856 2746866 TBR1 JASPAR yes 52776088
chr17 2746856 2746869 SMAD2 JASPAR yes 52776089
Genes associated with rs562295904[chr17:2746856], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More