EnhancerDB
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  3. rs562342806[chr2:38656501]
Enhancers that have rs562342806[chr2:38656501]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38653105 38683515 enh33236
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Breast Uterus Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs562342806[chr2:38656501]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38656482 38656502 RREB1 JASPAR yes 73139294
chr2 38656484 38656504 RREB1 JASPAR yes 73139295
chr2 38656486 38656506 RREB1 JASPAR yes 73139296
chr2 38656488 38656508 RREB1 JASPAR yes 73139297
chr2 38656490 38656510 RREB1 JASPAR yes 73139298
chr2 38656492 38656512 RREB1 JASPAR yes 73139299
chr2 38656494 38656514 RREB1 JASPAR yes 73139300
chr2 38656500 38656520 RREB1 JASPAR yes 73139301
Genes associated with rs562342806[chr2:38656501], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More