EnhancerDB
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  3. rs562438472[chr6:43666371]
Enhancers that have rs562438472[chr6:43666371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43661268 43695735 enh9137
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562438472[chr6:43666371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43666360 43666380 RREB1 JASPAR yes 101775245
chr6 43666361 43666381 RREB1 JASPAR yes 101775246
chr6 43666363 43666383 RREB1 JASPAR yes 101775247
chr6 43666364 43666376 FOXI1 JASPAR yes 101775248
chr6 43666365 43666385 RREB1 JASPAR yes 101775249
chr6 43666367 43666387 RREB1 JASPAR yes 101775250
chr6 43666369 43666389 RREB1 JASPAR yes 101775251
chr6 43666371 43666391 RREB1 JASPAR yes 101775252
Genes associated with rs562438472[chr6:43666371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More