EnhancerDB
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  3. rs562512399[chr5:77886264]
Enhancers that have rs562512399[chr5:77886264]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77878525 77914000 enh48956
Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs562512399[chr5:77886264]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77886261 77886272 FOXC1 JASPAR yes 63603318
chr5 77886262 77886266 YY1 TRANSFAC yes 63603319
Genes associated with rs562512399[chr5:77886264], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More