EnhancerDB
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  3. rs562519152[chr1:168445414]
Enhancers that have rs562519152[chr1:168445414]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs562519152[chr1:168445414]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168445161 168446566 ZNF274 GTRD no Bone Marrow (K562) 21348273
chr1 168445161 168446566 ZNF274 GTRD no Bone Marrow (K562) 107844746
chr1 168445336 168446302 ZNF274 GTRD no Bone Marrow (K562) 21348274
chr1 168445336 168446302 ZNF274 GTRD no Bone Marrow (K562) 107844747
chr1 168445407 168446447 ZNF274 GTRD no Bone Marrow (K562) 21348275
chr1 168445407 168446447 ZNF274 GTRD no Bone Marrow (K562) 107844748
chr1 168445411 168445420 TFAP2A JASPAR yes 32929430
Genes associated with rs562519152[chr1:168445414], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More