EnhancerDB
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  3. rs562543339[chr5:77810693]
Enhancers that have rs562543339[chr5:77810693]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs562543339[chr5:77810693]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77810685 77810695 NFIA JASPAR yes 63595096
chr5 77810686 77810695 NFIX JASPAR yes 63595097
chr5 77810687 77810693 NFIC JASPAR yes 63595098
Genes associated with rs562543339[chr5:77810693], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More