EnhancerDB
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  3. rs562547312[chr3:153002323]
Enhancers that have rs562547312[chr3:153002323]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 152999949 153013375 enh21048
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr3 153002176 153002347 vista42857
VISTA
Transcript factors that have rs562547312[chr3:153002323]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 153002065 153002449 MYC UCSC Txn Factor no Conserved 108530773
chr3 153002092 153002442 MAX UCSC Txn Factor no Conserved 108530774
chr3 153002118 153002442 CEBPB UCSC Txn Factor no Conserved 108530775
chr3 153002235 153002432 SPI1 UCSC Txn Factor no Conserved 108530776
chr3 153002319 153002340 IRF1 JASPAR yes 6757207
chr3 153002319 153002340 IRF1 JASPAR yes 71071267
chr3 153002323 153002337 SPI1 JASPAR yes 6757208
chr3 153002323 153002337 SPIC JASPAR yes 6757209
chr3 153002323 153002337 SPI1 JASPAR yes 71071268
chr3 153002323 153002337 SPIC JASPAR yes 71071269
Genes associated with rs562547312[chr3:153002323], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More