EnhancerDB
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  3. rs562594050[chr14:55554292]
Enhancers that have rs562594050[chr14:55554292]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 55550545 55578795 enh15631
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562594050[chr14:55554292]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 55553608 55554357 ZNF143 GTRD no Epithelial (MCF-7) 21619832
chr14 55553727 55554372 ZNF143 GTRD no Epithelial (MCF-7) 21619839
chr14 55554004 55554390 ZNF143 GTRD no Epithelial (MCF-7) 21619845
chr14 55554285 55554300 FOXP1 JASPAR yes 115527286
chr14 55554286 55554297 HOXC13 JASPAR yes 115527287
chr14 55554287 55554308 IRF1 JASPAR yes 115527288
chr14 55554289 55554304 FOXP1 JASPAR yes 115527289
chr14 55554290 55554305 FOXP1 JASPAR yes 115527290
chr14 55554291 55554297 TBP TRANSFAC yes 115527291
chr14 55554291 55554306 FOXP1 JASPAR yes 115527292
chr14 55554292 55554307 FOXP1 JASPAR yes 115527293
chr14 55554292 55554313 IRF1 JASPAR yes 115527294
Genes associated with rs562594050[chr14:55554292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More