EnhancerDB
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  3. rs562631145[chr1:234887717]
Enhancers that have rs562631145[chr1:234887717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234877045 234913055 enh12796
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562631145[chr1:234887717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234887465 234887941 ZNF274 GTRD no Bone Marrow (K562) 21397565
chr1 234887707 234887717 ETV3 JASPAR yes 36311283
chr1 234887710 234887717 POU2F1 TRANSFAC yes 36311284
chr1 234887711 234887726 JUND JASPAR yes 36311285
chr1 234887713 234887727 ATF7 JASPAR yes 36311286
chr1 234887713 234887727 BATF3 JASPAR yes 36311287
chr1 234887714 234887726 JDP2 JASPAR yes 36311288
chr1 234887714 234887729 JUND JASPAR yes 36311289
chr1 234887715 234887724 JUN TRANSFAC yes 36311290
chr1 234887715 234887728 JUN JASPAR yes 36311291
chr1 234887716 234887723 JUN TRANSFAC yes 36311292
chr1 234887716 234887732 RFX2 JASPAR yes 36311293
chr1 234887716 234887732 RFX3 JASPAR yes 36311294
chr1 234887716 234887732 RFX4 JASPAR yes 36311295
chr1 234887716 234887732 RFX5 JASPAR yes 36311296
chr1 234887717 234887736 RFX2 JASPAR yes 36311297
Genes associated with rs562631145[chr1:234887717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More