EnhancerDB
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  3. rs562655955[chr6:34624012]
Enhancers that have rs562655955[chr6:34624012]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34618105 34636675 enh9069
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562655955[chr6:34624012]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34623905 34625770 POLR2A UCSC Txn Factor no Conserved 108539803
chr6 34623905 34625770 POLR2A UCSC Txn Factor no Conserved 108539804
chr6 34624009 34624024 FOXP1 JASPAR yes 101228883
chr6 34624010 34624025 FOXP1 JASPAR yes 101228884
chr6 34624011 34624026 FOXP1 JASPAR yes 101228885
chr6 34624011 34624032 IRF1 JASPAR yes 101228886
chr6 34624012 34624027 FOXP1 JASPAR yes 101228887
chr6 34624012 34624033 IRF1 JASPAR yes 101228888
Genes associated with rs562655955[chr6:34624012], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More