EnhancerDB
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  3. rs562700437[chr17:48964399]
Enhancers that have rs562700437[chr17:48964399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs562700437[chr17:48964399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48964045 48964654 TCF7L2 GTRD no Colon (HCT116) 21770256
chr17 48964102 48964597 ZNF274 GTRD no Bone Marrow (K562) 21770257
chr17 48964104 48965074 TCF7L2 GTRD no Colon (HCT116) 21770258
chr17 48964156 48964505 ZNF143 GTRD no Epithelial (MCF-7) 21770259
chr17 48964156 48964705 ZNF274 GTRD no Bone Marrow (K562) 21770260
chr17 48964173 48964553 ZNF274 GTRD no Liver (HepG2) 21770261
chr17 48964177 48964570 TCF7L2 GTRD no Colon (HCT116) 21770262
chr17 48964213 48964940 TCF7L2 GTRD no Colon (HCT116) 21770263
chr17 48964283 48964574 ZNF274 GTRD no Liver (HepG2) 21770264
chr17 48964385 48964399 PLAG1 JASPAR yes 54729172
chr17 48964398 48964404 ZNF354C JASPAR yes 54729174
Genes associated with rs562700437[chr17:48964399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More