EnhancerDB
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  3. rs562708789[chr2:232534029]
Enhancers that have rs562708789[chr2:232534029]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562708789[chr2:232534029]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232534018 232534029 ELK4 JASPAR yes 81734193
chr2 232534019 232534031 ELF1 JASPAR yes 81734194
chr2 232534019 232534031 ELF4 JASPAR yes 81734195
chr2 232534019 232534032 ELF1 JASPAR yes 81734196
Genes associated with rs562708789[chr2:232534029], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More