EnhancerDB
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  3. rs562720148[chr12:46609973]
Enhancers that have rs562720148[chr12:46609973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46599536 46618695 enh2312
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (A673) Heart
chr12 46609835 46610258 vista13215
VISTA
Transcript factors that have rs562720148[chr12:46609973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 21541050
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 108026933
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 108026934
chr12 46609843 46610503 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541069
chr12 46609843 46610503 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026966
chr12 46609873 46610503 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541070
chr12 46609873 46610503 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026967
chr12 46609912 46610596 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541071
chr12 46609912 46610596 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026968
chr12 46609924 46610444 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541072
chr12 46609924 46610444 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026969
chr12 46609928 46610173 SOX2 GTRD no Neural Stem Cells (H9) 21541073
chr12 46609928 46610173 SOX2 GTRD no Neural Stem Cells (H9) 108026970
chr12 46609947 46610467 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541074
chr12 46609947 46610467 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026971
chr12 46609951 46610373 RELA UCSC Txn Factor no Conserved 108026972
chr12 46609956 46610340 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541075
chr12 46609956 46610340 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026973
chr12 46609961 46609982 ZNF263 JASPAR yes 82394403
chr12 46609961 46609982 ZNF263 JASPAR yes 120604356
chr12 46609964 46609985 ZNF263 JASPAR yes 82394404
chr12 46609964 46609985 ZNF263 JASPAR yes 120604357
chr12 46609966 46609981 PRDM1 JASPAR yes 82394405
chr12 46609966 46609981 PRDM1 JASPAR yes 120604358
chr12 46609966 46609985 REST JASPAR yes 82394406
chr12 46609966 46609985 REST JASPAR yes 120604359
chr12 46609967 46609988 ZNF263 JASPAR yes 82394407
chr12 46609967 46609988 ZNF263 JASPAR yes 120604360
chr12 46609970 46609991 ZNF263 JASPAR yes 82394408
chr12 46609970 46609991 ZNF263 JASPAR yes 120604361
chr12 46609971 46609992 ZNF263 JASPAR yes 82394409
chr12 46609971 46609992 ZNF263 JASPAR yes 120604362
Genes associated with rs562720148[chr12:46609973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More