EnhancerDB
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  3. rs56272221[chr16:89515622]
Enhancers that have rs56272221[chr16:89515622]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56272221[chr16:89515622]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89515601 89515622 IRF1 JASPAR yes 12345840
chr16 89515603 89515624 IRF1 JASPAR yes 12345842
chr16 89515613 89515629 SOX8 JASPAR yes 12345843
Genes associated with rs56272221[chr16:89515622], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More