EnhancerDB
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  3. rs562739862[chr1:212772943]
Enhancers that have rs562739862[chr1:212772943]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212765205 212784697 enh12647
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs562739862[chr1:212772943]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212772930 212772945 LEF1 JASPAR yes 35140089
chr1 212772931 212772945 TCF7L2 JASPAR yes 35140090
chr1 212772940 212772945 GATA2 JASPAR yes 35140093
chr1 212772942 212772948 MZF1 JASPAR yes 35140094
Genes associated with rs562739862[chr1:212772943], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More