EnhancerDB
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  3. rs562770864[chr16:88839729]
Enhancers that have rs562770864[chr16:88839729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562770864[chr16:88839729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 21736969
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223440
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223441
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223442
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223443
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 21736971
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223445
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223446
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223447
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223448
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 21736980
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 108223459
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 108223460
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 108223461
chr16 88837097 88841116 ZNF143 GTRD no Epithelial (MCF-7) 21736982
chr16 88837097 88841116 ZNF143 GTRD no Epithelial (MCF-7) 108223463
chr16 88837097 88841116 ZNF143 GTRD no Epithelial (MCF-7) 108223464
chr16 88837097 88841116 ZNF143 GTRD no Epithelial (MCF-7) 108223465
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 21736984
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 108223467
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 108223468
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 108223469
chr16 88837828 88841387 ZNF143 GTRD no Epithelial (MCF-7) 21737045
chr16 88837828 88841387 ZNF143 GTRD no Epithelial (MCF-7) 108223544
chr16 88837828 88841387 ZNF143 GTRD no Epithelial (MCF-7) 108223545
chr16 88838123 88840271 TCF7L2 GTRD no Colon (HCT116) 21737046
chr16 88838123 88840271 TCF7L2 GTRD no Colon (HCT116) 108223546
chr16 88838123 88840271 TCF7L2 GTRD no Colon (HCT116) 108223547
chr16 88838153 88840965 ZNF274 GTRD no Bone Marrow (K562) 21737047
chr16 88838153 88840965 ZNF274 GTRD no Bone Marrow (K562) 108223548
chr16 88838153 88840965 ZNF274 GTRD no Bone Marrow (K562) 108223549
chr16 88838153 88840983 ZNF274 GTRD no Bone Marrow (K562) 21737048
chr16 88838153 88840983 ZNF274 GTRD no Bone Marrow (K562) 108223550
chr16 88838153 88840983 ZNF274 GTRD no Bone Marrow (K562) 108223551
chr16 88838360 88839861 ZNF274 GTRD no Bone Marrow (K562) 21737049
chr16 88838360 88839861 ZNF274 GTRD no Bone Marrow (K562) 108223552
chr16 88838449 88839908 ZNF274 GTRD no Liver (HepG2) 21737050
chr16 88838449 88839908 ZNF274 GTRD no Liver (HepG2) 108223553
chr16 88838555 88839832 ZNF274 GTRD no Bone Marrow (K562) 21737053
chr16 88838555 88839832 ZNF274 GTRD no Bone Marrow (K562) 108223556
chr16 88838585 88839747 ZBTB33 GTRD no Lung (A549) 108223558
chr16 88838642 88839739 ZNF274 GTRD no Bone Marrow (K562) 21737056
chr16 88838642 88839739 ZNF274 GTRD no Bone Marrow (K562) 108223560
chr16 88838703 88839794 ZNF143 GTRD no Epithelial (MCF-7) 21737060
chr16 88838703 88839794 ZNF143 GTRD no Epithelial (MCF-7) 108223565
chr16 88838704 88839744 ZNF274 GTRD no Bone Marrow (K562) 21737061
chr16 88838704 88839744 ZNF274 GTRD no Bone Marrow (K562) 108223566
chr16 88838780 88840015 ZNF274 GTRD no Liver (HepG2) 21737069
chr16 88838780 88840015 ZNF274 GTRD no Liver (HepG2) 108223575
chr16 88838780 88840015 ZNF274 GTRD no Liver (HepG2) 108223576
chr16 88838813 88839775 ZNF274 GTRD no Liver (HepG2) 21737073
chr16 88838813 88839775 ZNF274 GTRD no Liver (HepG2) 108223580
chr16 88838921 88839730 ZNF274 GTRD no Bone Marrow (K562) 21737104
chr16 88838921 88839730 ZNF274 GTRD no Bone Marrow (K562) 108223612
chr16 88838984 88839738 ZNF274 GTRD no Bone Marrow (K562) 21737127
chr16 88838984 88839738 ZNF274 GTRD no Bone Marrow (K562) 108223637
chr16 88839217 88839755 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737145
chr16 88839217 88839755 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223657
chr16 88839217 88840037 MAX UCSC Txn Factor no Conserved 108223658
chr16 88839217 88840037 MAX UCSC Txn Factor no Conserved 108223659
chr16 88839262 88839772 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737148
chr16 88839262 88839772 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223662
chr16 88839704 88840037 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737151
chr16 88839704 88840037 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223666
chr16 88839719 88840016 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737152
chr16 88839719 88840016 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223667
chr16 88839723 88839732 RUNX2 JASPAR yes 12302797
chr16 88839723 88839733 RUNX3 JASPAR yes 12302798
Genes associated with rs562770864[chr16:88839729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More