EnhancerDB
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  3. rs562780693[chr17:2802492]
Enhancers that have rs562780693[chr17:2802492]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs562780693[chr17:2802492]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2802479 2802500 IRF1 JASPAR yes 52784222
chr17 2802480 2802495 FOXP1 JASPAR yes 52784223
chr17 2802480 2802501 IRF1 JASPAR yes 52784224
chr17 2802481 2802492 FOXP2 JASPAR yes 52784225
chr17 2802481 2802493 FOXC2 JASPAR yes 52784226
chr17 2802481 2802496 STAT2 JASPAR yes 52784227
chr17 2802482 2802497 FOXP1 JASPAR yes 52784228
chr17 2802484 2802496 IRF1 JASPAR yes 52784229
chr17 2802485 2802500 MEF2A JASPAR yes 52784230
chr17 2802485 2802506 IRF1 JASPAR yes 52784231
chr17 2802486 2802501 FOXP1 JASPAR yes 52784232
chr17 2802486 2802501 MEF2C JASPAR yes 52784233
chr17 2802486 2802507 IRF1 JASPAR yes 52784234
chr17 2802487 2802499 FOXC2 JASPAR yes 52784235
chr17 2802487 2802499 MEF2A JASPAR yes 52784236
chr17 2802487 2802499 MEF2B JASPAR yes 52784237
chr17 2802487 2802499 MEF2D JASPAR yes 52784238
chr17 2802488 2802498 MEF2A JASPAR yes 52784239
chr17 2802489 2802493 YY1 TRANSFAC yes 52784240
chr17 2802490 2802504 IRF7 JASPAR yes 52784241
Genes associated with rs562780693[chr17:2802492], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More