EnhancerDB
  1. Home
  2. SNP
  3. rs562798121[chr1:52089766]
Enhancers that have rs562798121[chr1:52089766]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52082245 52099655 enh11847
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs562798121[chr1:52089766]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52089757 52089772 MEF2A JASPAR yes 28855476
chr1 52089758 52089773 MEF2C JASPAR yes 28855477
chr1 52089759 52089771 MEF2A JASPAR yes 28855478
chr1 52089759 52089771 MEF2B JASPAR yes 28855479
chr1 52089759 52089771 MEF2D JASPAR yes 28855480
Genes associated with rs562798121[chr1:52089766], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More