EnhancerDB
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  3. rs562811343[chr1:235096363]
Enhancers that have rs562811343[chr1:235096363]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562811343[chr1:235096363]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235095722 235096456 ZNF274 GTRD no Liver (HepG2) 21401463
chr1 235095769 235096457 ZNF274 GTRD no Liver (HepG2) 21401465
chr1 235095776 235096417 ZNF274 GTRD no Liver (HepG2) 21401466
chr1 235095837 235096424 ZNF274 GTRD no Liver (HepG2) 21401467
chr1 235095895 235096407 ZNF143 GTRD no Epithelial (MCF-7) 21401468
chr1 235095995 235096410 ZNF143 GTRD no Epithelial (MCF-7) 21401469
chr1 235096298 235096879 TCF12 UCSC Txn Factor no Conserved 107884660
chr1 235096298 235096879 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107884661
chr1 235096325 235096921 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21401470
chr1 235096325 235096921 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107884662
chr1 235096328 235096872 EP300 UCSC Txn Factor no Conserved 107884663
chr1 235096328 235096872 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107884664
chr1 235096333 235096897 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401471
chr1 235096333 235096897 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107884665
chr1 235096353 235096893 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107884666
chr1 235096356 235096640 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107884667
chr1 235096360 235096772 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401472
chr1 235096360 235096772 FOXA2 UCSC Txn Factor no Conserved 107884668
chr1 235096360 235096772 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107884669
chr1 235096362 235096370 EHF JASPAR yes 36334972
chr1 235096362 235096840 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401473
chr1 235096362 235096840 NFIC UCSC Txn Factor no Conserved 107884670
chr1 235096362 235096840 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107884671
Genes associated with rs562811343[chr1:235096363], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More